[llvm-commits] SIBsim4 for llvm-test

Nick Lewycky nicholas at mxc.ca
Wed Feb 14 20:55:30 PST 2007

This is a new program I've prepared for llvm-test, going under
MultiSource/Applications. It's a program to align an expressed DNA
sequenec with a genomic sequence, SIBsim4 v0.14, from
http://sibsim4.sourceforge.net/ .

It's entirely self-contained relying only on libc and is licensed under
the GPL license. I've included two 300k test files are derived from
bioperl-run/t/data (Artistic License) and NCBI GenBank (no known


It works with a GCC/CBE=0.80 and GCC/LLC=0.76. JIT fails because it
doesn't find the "optarg" symbol which is an extern char * declared by
stdio.h and defined in POSIX.

Nick Lewycky
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