[llvm-commits] SIBsim4 for llvm-test

[Nick Lewycky]

This is a new program I've prepared for llvm-test, going under
MultiSource/Applications. It's a program to align an expressed DNA
sequenec with a genomic sequence, SIBsim4 v0.14, from
http://sibsim4.sourceforge.net/ .

It's entirely self-contained relying only on libc and is licensed under
the GPL license. I've included two 300k test files are derived from
bioperl-run/t/data (Artistic License) and NCBI GenBank (no known
restrictions).

http://cvs.bioperl.org/cgi-bin/viewcvs/viewcvs.cgi/bioperl-run/t/data/?cvsroot=bioperl
http://www.ncbi.nlm.nih.gov/Genbank/GenbankOverview.html

It works with a GCC/CBE=0.80 and GCC/LLC=0.76. JIT fails because it
doesn't find the "optarg" symbol which is an extern char * declared by
stdio.h and defined in POSIX.

Nick Lewycky
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